EnhancerDB
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  3. rs199883833[chr1:27980948]
Enhancers that have rs199883833[chr1:27980948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199883833[chr1:27980948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27980943 27980958 FOXP1 JASPAR yes 27718974
chr1 27980943 27980964 IRF1 JASPAR yes 27718975
chr1 27980946 27980950 YY1 TRANSFAC yes 27718976
chr1 27980947 27980962 FOXP1 JASPAR yes 27718977
chr1 27980948 27980963 FOXP1 JASPAR yes 27718978
Genes associated with rs199883833[chr1:27980948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More