EnhancerDB
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  3. rs199892713[chr6:34621016]
Enhancers that have rs199892713[chr6:34621016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34618105 34636675 enh9069
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199892713[chr6:34621016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34620998 34621019 IRF1 JASPAR yes 101228493
chr6 34621003 34621018 MEF2A JASPAR yes 101228501
chr6 34621004 34621019 MEF2C JASPAR yes 101228502
chr6 34621004 34621025 IRF1 JASPAR yes 101228503
chr6 34621005 34621017 MEF2A JASPAR yes 101228504
chr6 34621005 34621017 MEF2B JASPAR yes 101228505
chr6 34621005 34621017 MEF2D JASPAR yes 101228506
chr6 34621006 34621016 MEF2A JASPAR yes 101228507
Genes associated with rs199892713[chr6:34621016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More