EnhancerDB
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  3. rs199901917[chr17:25672872]
Enhancers that have rs199901917[chr17:25672872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199901917[chr17:25672872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25672026 25672968 POLR2A UCSC Txn Factor no Conserved 108245187
chr17 25672365 25672945 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245203
chr17 25672392 25672968 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747639
chr17 25672392 25672968 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245206
chr17 25672491 25672937 MYC UCSC Txn Factor no Conserved 108245210
chr17 25672548 25672878 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245214
chr17 25672553 25672917 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747646
chr17 25672553 25672917 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245216
chr17 25672557 25672893 YY1 UCSC Txn Factor no Conserved 108245217
chr17 25672594 25672872 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245219
chr17 25672690 25672894 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747648
Genes associated with rs199901917[chr17:25672872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More