EnhancerDB
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  3. rs199920230[chr12:46894078]
Enhancers that have rs199920230[chr12:46894078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46872285 46895935 enh14678
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Lung Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs199920230[chr12:46894078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46894069 46894089 RREB1 JASPAR yes 120630713
chr12 46894070 46894090 RREB1 JASPAR yes 120630714
chr12 46894073 46894093 RREB1 JASPAR yes 120630715
chr12 46894074 46894094 RREB1 JASPAR yes 120630716
chr12 46894077 46894083 TCF4 TRANSFAC yes 120630717
chr12 46894077 46894089 FOXI1 JASPAR yes 120630718
chr12 46894077 46894092 FOXP1 JASPAR yes 120630719
chr12 46894078 46894098 RREB1 JASPAR yes 120630720
Genes associated with rs199920230[chr12:46894078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More