EnhancerDB
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  3. rs199984562[chr12:52613159]
Enhancers that have rs199984562[chr12:52613159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199984562[chr12:52613159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52612752 52613477 ZNF143 GTRD no Epithelial (MCF-7) 21546836
chr12 52612804 52613302 ZNF143 GTRD no Epithelial (MCF-7) 21546837
chr12 52612836 52613302 ZNF143 GTRD no Epithelial (MCF-7) 21546838
chr12 52613154 52613159 GATA1 TRANSFAC yes 120929741
chr12 52613154 52613160 GATA3 JASPAR yes 120929742
chr12 52613158 52613162 NFE TRANSFAC yes 120929743
chr12 52613158 52613163 GATA1 TRANSFAC yes 120929744
chr12 52613158 52613164 GATA3 JASPAR yes 120929745
Genes associated with rs199984562[chr12:52613159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More