EnhancerDB
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  3. rs200001763[chr12:109081700]
Enhancers that have rs200001763[chr12:109081700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109075725 109093399 enh14973
Bone Marrow (K562) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200001763[chr12:109081700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109081683 109081700 RXRA JASPAR yes 123612826
chr12 109081687 109081701 RXRB JASPAR yes 123612828
chr12 109081687 109081701 RXRG JASPAR yes 123612829
chr12 109081687 109081702 NR2C2 JASPAR yes 123612830
chr12 109081690 109081703 NR2F1 JASPAR yes 123612831
chr12 109081694 109081704 RORA JASPAR yes 123612832
chr12 109081698 109081713 FOXP1 JASPAR yes 123612833
chr12 109081699 109081714 FOXP1 JASPAR yes 123612834
chr12 109081700 109081715 FOXP1 JASPAR yes 123612835
Genes associated with rs200001763[chr12:109081700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More