EnhancerDB
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  3. rs200022465[chr17:42179954]
Enhancers that have rs200022465[chr17:42179954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200022465[chr17:42179954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42179948 42179962 RXRG JASPAR yes 54387414
chr17 42179948 42179963 NR2C2 JASPAR yes 54387415
chr17 42179951 42179964 NR2F1 JASPAR yes 54387416
Genes associated with rs200022465[chr17:42179954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More