EnhancerDB
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  3. rs200045855[chr19:2606666]
Enhancers that have rs200045855[chr19:2606666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs200045855[chr19:2606666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2606654 2606666 FOXC2 JASPAR yes 112081909
chr19 2606656 2606671 HNF1A JASPAR yes 112081910
chr19 2606657 2606671 POU4F1 JASPAR yes 112081911
chr19 2606657 2606673 POU4F2 JASPAR yes 112081912
chr19 2606657 2606673 POU4F3 JASPAR yes 112081913
chr19 2606658 2606674 POU4F3 JASPAR yes 112081914
chr19 2606660 2606670 LHX6 JASPAR yes 112081915
chr19 2606660 2606670 MNX1 JASPAR yes 112081916
chr19 2606660 2606670 POU6F1 JASPAR yes 112081917
chr19 2606660 2606674 POU4F1 JASPAR yes 112081918
chr19 2606660 2606675 HNF1A JASPAR yes 112081919
chr19 2606661 2606669 LMX1A JASPAR yes 112081920
chr19 2606661 2606669 LMX1B JASPAR yes 112081921
chr19 2606661 2606669 NKX6-1 JASPAR yes 112081922
chr19 2606661 2606669 NKX6-2 JASPAR yes 112081923
chr19 2606661 2606669 VAX1 JASPAR yes 112081924
chr19 2606661 2606669 VAX2 JASPAR yes 112081925
chr19 2606661 2606669 VSX1 JASPAR yes 112081926
chr19 2606661 2606669 VSX2 JASPAR yes 112081927
chr19 2606661 2606675 POU4F1 JASPAR yes 112081928
chr19 2606661 2606677 POU4F2 JASPAR yes 112081929
chr19 2606661 2606677 POU4F3 JASPAR yes 112081930
chr19 2606662 2606672 PAX3 JASPAR yes 112081931
chr19 2606662 2606672 PAX7 JASPAR yes 112081932
chr19 2606662 2606673 PHOX2A JASPAR yes 112081933
chr19 2606662 2606673 PROP1 JASPAR yes 112081934
chr19 2606663 2606677 POU4F1 JASPAR yes 112081935
chr19 2606663 2606678 HNF1A JASPAR yes 112081936
chr19 2606664 2606674 GSX1 JASPAR yes 112081937
chr19 2606664 2606674 GSX2 JASPAR yes 112081938
chr19 2606664 2606674 LHX2 JASPAR yes 112081939
chr19 2606664 2606674 LHX6 JASPAR yes 112081940
chr19 2606664 2606674 MNX1 JASPAR yes 112081941
chr19 2606664 2606674 NOTO JASPAR yes 112081942
chr19 2606664 2606674 POU6F1 JASPAR yes 112081943
chr19 2606664 2606674 RAX JASPAR yes 112081944
chr19 2606664 2606679 HNF1A JASPAR yes 112081945
chr19 2606665 2606673 ISX JASPAR yes 112081946
chr19 2606665 2606673 LMX1A JASPAR yes 112081947
chr19 2606665 2606673 LMX1B JASPAR yes 112081948
chr19 2606665 2606673 NKX6-1 JASPAR yes 112081949
chr19 2606665 2606673 NKX6-2 JASPAR yes 112081950
chr19 2606665 2606673 PRRX1 JASPAR yes 112081951
chr19 2606665 2606673 RAX2 JASPAR yes 112081952
chr19 2606665 2606673 SHOX JASPAR yes 112081953
chr19 2606665 2606673 UNCX JASPAR yes 112081954
chr19 2606665 2606673 VAX1 JASPAR yes 112081955
chr19 2606665 2606676 PHOX2A JASPAR yes 112081956
chr19 2606665 2606676 PROP1 JASPAR yes 112081957
chr19 2606665 2606679 POU4F1 JASPAR yes 112081958
chr19 2606665 2606681 POU4F2 JASPAR yes 112081959
chr19 2606665 2606681 POU4F3 JASPAR yes 112081960
chr19 2606666 2606676 PAX3 JASPAR yes 112081961
chr19 2606666 2606676 PAX7 JASPAR yes 112081962
chr19 2606666 2606677 PHOX2A JASPAR yes 112081963
chr19 2606666 2606677 PROP1 JASPAR yes 112081964
Genes associated with rs200045855[chr19:2606666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More