EnhancerDB
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  3. rs200049602[chr1:235131281]
Enhancers that have rs200049602[chr1:235131281]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs200049602[chr1:235131281]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 21402706
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 21402707
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 107885434
chr1 235126742 235131363 ZNF274 GTRD no Liver (HepG2) 21402723
chr1 235126742 235131363 ZNF274 GTRD no Liver (HepG2) 21402724
chr1 235126804 235131348 ZNF274 GTRD no Blood (GM12878) 21402726
chr1 235126804 235131348 ZNF274 GTRD no Blood (GM12878) 21402727
chr1 235130609 235131330 ZNF274 GTRD no Liver (HepG2) 21402808
chr1 235130637 235131320 ZNF274 GTRD no Blood (GM12878) 21402809
chr1 235130722 235131298 ZNF274 GTRD no Liver (HepG2) 21402811
chr1 235131272 235131285 POU2F2 JASPAR yes 36339514
chr1 235131273 235131285 POU3F1 JASPAR yes 36339515
chr1 235131273 235131285 POU3F2 JASPAR yes 36339516
chr1 235131273 235131286 POU3F3 JASPAR yes 36339517
chr1 235131274 235131286 POU2F1 JASPAR yes 36339518
chr1 235131274 235131287 POU3F3 JASPAR yes 36339519
chr1 235131275 235131284 POU3F4 JASPAR yes 36339520
chr1 235131275 235131284 POU5F1B JASPAR yes 36339521
chr1 235131275 235131287 POU3F1 JASPAR yes 36339522
chr1 235131275 235131287 POU3F2 JASPAR yes 36339523
chr1 235131275 235131288 POU2F2 JASPAR yes 36339524
chr1 235131276 235131285 POU3F4 JASPAR yes 36339525
chr1 235131276 235131285 POU5F1B JASPAR yes 36339526
Genes associated with rs200049602[chr1:235131281], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More