EnhancerDB
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Enhancers that have rs200144023[chr18:56208999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56204885 56211735 enh4869
Liver Astrocyte Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr18 56208933 56209328 vista27610
VISTA
Transcript factors that have rs200144023[chr18:56208999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56208771 56209455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824184
chr18 56208771 56209455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338426
chr18 56208837 56209433 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824185
chr18 56208837 56209433 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338427
chr18 56208841 56209221 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824186
chr18 56208841 56209221 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338428
chr18 56208849 56209439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824187
chr18 56208849 56209439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338429
chr18 56208849 56209675 IKZF1 UCSC Txn Factor no Conserved 108338430
chr18 56208863 56209379 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824188
chr18 56208863 56209379 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338431
chr18 56208903 56209375 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824189
chr18 56208903 56209375 NFIC UCSC Txn Factor no Conserved 108338432
chr18 56208903 56209375 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338433
chr18 56208927 56209327 FOS UCSC Txn Factor no Conserved 108338434
chr18 56208933 56209317 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824190
chr18 56208933 56209317 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338435
chr18 56208935 56209305 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824191
chr18 56208935 56209305 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338436
chr18 56208940 56209296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824192
chr18 56208940 56209296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338437
chr18 56208941 56209351 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108338438
chr18 56208946 56209276 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824193
chr18 56208946 56209276 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338439
chr18 56208953 56209213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824194
chr18 56208953 56209213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338440
chr18 56208956 56209296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824195
chr18 56208956 56209296 RUNX3 UCSC Txn Factor no Conserved 108338441
chr18 56208956 56209296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338442
chr18 56208961 56209241 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824196
chr18 56208961 56209241 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338443
chr18 56208964 56209274 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824197
chr18 56208964 56209274 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338444
chr18 56208967 56209298 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824198
chr18 56208967 56209298 ATF2 UCSC Txn Factor no Conserved 108338445
chr18 56208967 56209298 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338446
chr18 56208976 56209296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824199
chr18 56208976 56209296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338447
chr18 56208977 56209267 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824200
chr18 56208977 56209267 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338448
chr18 56208979 56209259 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824201
chr18 56208979 56209259 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338449
chr18 56208979 56209319 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824202
chr18 56208979 56209319 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338450
chr18 56208980 56209310 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824203
chr18 56208980 56209310 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338451
chr18 56208983 56209248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824204
chr18 56208983 56209248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338452
chr18 56208983 56209293 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824205
chr18 56208983 56209293 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338453
chr18 56208985 56209001 NFYA JASPAR yes 42715524
chr18 56208985 56209001 NFYA JASPAR yes 110957000
chr18 56208986 56209004 NFYA JASPAR yes 42715525
chr18 56208986 56209004 NFYA JASPAR yes 110957001
chr18 56208988 56209284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824206
chr18 56208988 56209284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338454
Genes associated with rs200144023[chr18:56208999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More