EnhancerDB
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  3. rs2001577[chr1:24627062]
Enhancers that have rs2001577[chr1:24627062]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2001577[chr1:24627062]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24627052 24627069 ESR1 JASPAR yes 27498269
chr1 24627055 24627070 RUNX2 JASPAR yes 27498270
chr1 24627055 24627076 ZNF263 JASPAR yes 27498271
chr1 24627062 24627074 HINFP JASPAR yes 27498272
Genes associated with rs2001577[chr1:24627062], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More