EnhancerDB
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  3. rs200170699[chr17:25661002]
Enhancers that have rs200170699[chr17:25661002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200170699[chr17:25661002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25660985 25661006 IRF1 JASPAR yes 53620684
chr17 25660991 25661012 IRF1 JASPAR yes 53620685
chr17 25660995 25661007 IRF1 JASPAR yes 53620686
chr17 25660996 25661017 IRF1 JASPAR yes 53620687
chr17 25660997 25661003 TCF4 TRANSFAC yes 53620688
chr17 25660997 25661012 FOXP1 JASPAR yes 53620689
chr17 25660998 25661009 FOXP2 JASPAR yes 53620690
chr17 25660998 25661010 FOXC2 JASPAR yes 53620691
Genes associated with rs200170699[chr17:25661002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More