EnhancerDB
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  3. rs200188864[chr17:65397045]
Enhancers that have rs200188864[chr17:65397045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs200188864[chr17:65397045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65397027 65397048 IRF1 JASPAR yes 55498364
chr17 65397029 65397050 IRF1 JASPAR yes 55498366
chr17 65397033 65397054 IRF1 JASPAR yes 55498367
chr17 65397035 65397050 STAT2 JASPAR yes 55498368
chr17 65397036 65397050 SPIC JASPAR yes 55498369
chr17 65397036 65397050 STAT1 JASPAR yes 55498370
chr17 65397037 65397052 IRF9 JASPAR yes 55498371
chr17 65397040 65397055 FOXP1 JASPAR yes 55498372
chr17 65397041 65397052 FOXP2 JASPAR yes 55498373
Genes associated with rs200188864[chr17:65397045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More