EnhancerDB
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  3. rs200190011[chr1:16208842]
Enhancers that have rs200190011[chr1:16208842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16203705 16215635 enh81
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200190011[chr1:16208842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16204564 16209335 TCF7L2 GTRD no Colon (HCT116) 21325255
chr1 16204564 16209335 TCF7L2 GTRD no Colon (HCT116) 107802203
chr1 16208834 16208845 E2F4 JASPAR yes 27010138
chr1 16208834 16208845 E2F6 JASPAR yes 27010139
chr1 16208837 16208847 SP1 JASPAR yes 27010140
chr1 16208838 16208845 SP1 TRANSFAC yes 27010141
chr1 16208839 16208844 SP1 TRANSFAC yes 27010142
chr1 16208839 16208845 SP1 TRANSFAC yes 27010143
chr1 16208839 16208846 SP1 TRANSFAC yes 27010144
chr1 16208839 16208851 ZBTB7B JASPAR yes 27010145
chr1 16208841 16208851 ZNF740 JASPAR yes 27010146
chr1 16208842 16208852 ZNF740 JASPAR yes 27010147
Genes associated with rs200190011[chr1:16208842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 15479028 15546976 + TMEM51 ENSG00000171729.9 15479028 661866 Heart 0.248959 202
chr1 16340523 16346089 - HSPB7 ENSG00000173641.13 16346089 131681 Heart 0.121799 221