EnhancerDB
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  3. rs200192213[chr17:42186129]
Enhancers that have rs200192213[chr17:42186129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200192213[chr17:42186129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42186114 42186129 MEF2C JASPAR yes 54388242
chr17 42186114 42186135 IRF1 JASPAR yes 54388243
chr17 42186117 42186132 FOXP1 JASPAR yes 54388244
chr17 42186119 42186134 FOXP1 JASPAR yes 54388245
chr17 42186119 42186140 IRF1 JASPAR yes 54388246
chr17 42186120 42186141 IRF1 JASPAR yes 54388247
chr17 42186121 42186133 FOXC2 JASPAR yes 54388248
chr17 42186121 42186141 RREB1 JASPAR yes 54388249
chr17 42186122 42186133 FOXP2 JASPAR yes 54388250
chr17 42186124 42186139 FOXP1 JASPAR yes 54388251
chr17 42186124 42186145 IRF1 JASPAR yes 54388252
chr17 42186125 42186146 IRF1 JASPAR yes 54388253
chr17 42186126 42186146 RREB1 JASPAR yes 54388254
chr17 42186128 42186143 FOXP1 JASPAR yes 54388255
Genes associated with rs200192213[chr17:42186129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More