EnhancerDB
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  3. rs200208789[chr2:240191680]
Enhancers that have rs200208789[chr2:240191680]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200208789[chr2:240191680]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240191672 240191683 E2F4 JASPAR yes 82223948
chr2 240191674 240191684 SP1 JASPAR yes 82223949
chr2 240191675 240191681 SP1 TRANSFAC yes 82223950
chr2 240191675 240191685 SP1 JASPAR yes 82223951
chr2 240191676 240191683 SP1 TRANSFAC yes 82223952
chr2 240191677 240191682 SP1 TRANSFAC yes 82223953
chr2 240191677 240191683 SP1 TRANSFAC yes 82223954
chr2 240191677 240191684 SP1 TRANSFAC yes 82223955
chr2 240191677 240191689 E2F8 JASPAR yes 82223956
chr2 240191677 240191689 ZBTB7B JASPAR yes 82223957
chr2 240191678 240191692 GLIS3 JASPAR yes 82223958
Genes associated with rs200208789[chr2:240191680], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More