EnhancerDB
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  3. rs200209944[chr1:224028386]
Enhancers that have rs200209944[chr1:224028386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224017164 224031755 enh12713
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200209944[chr1:224028386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224028374 224028388 STAT1 JASPAR yes 35679087
chr1 224028374 224028389 PRDM1 JASPAR yes 35679088
chr1 224028374 224028389 STAT2 JASPAR yes 35679089
chr1 224028382 224028397 STAT2 JASPAR yes 35679090
chr1 224028384 224028398 IRF7 JASPAR yes 35679091
chr1 224028386 224028392 TCF4 TRANSFAC yes 35679092
Genes associated with rs200209944[chr1:224028386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More