EnhancerDB
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  3. rs200236560[chr12:106523764]
Enhancers that have rs200236560[chr12:106523764]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 106512365 106532655 enh29959
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs200236560[chr12:106523764]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 106523749 106523770 IRF1 JASPAR yes 123492791
chr12 106523750 106523771 IRF1 JASPAR yes 123492792
chr12 106523754 106523769 FOXP1 JASPAR yes 123492794
chr12 106523756 106523771 FOXP1 JASPAR yes 123492795
chr12 106523756 106523777 IRF1 JASPAR yes 123492796
Genes associated with rs200236560[chr12:106523764], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More