EnhancerDB
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  3. rs200270890[chr1:226003120]
Enhancers that have rs200270890[chr1:226003120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225998865 226010784 enh12726
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200270890[chr1:226003120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226003102 226003123 IRF1 JASPAR yes 35771013
chr1 226003103 226003124 IRF1 JASPAR yes 35771014
chr1 226003105 226003120 PRDM1 JASPAR yes 35771015
chr1 226003105 226003120 STAT2 JASPAR yes 35771016
chr1 226003107 226003128 IRF1 JASPAR yes 35771017
chr1 226003108 226003123 FOXP1 JASPAR yes 35771018
chr1 226003108 226003129 IRF1 JASPAR yes 35771019
chr1 226003109 226003130 IRF1 JASPAR yes 35771020
chr1 226003110 226003125 FOXP1 JASPAR yes 35771021
chr1 226003110 226003131 IRF1 JASPAR yes 35771022
chr1 226003111 226003132 IRF1 JASPAR yes 35771023
chr1 226003112 226003127 FOXP1 JASPAR yes 35771024
chr1 226003112 226003133 IRF1 JASPAR yes 35771025
chr1 226003113 226003128 FOXP1 JASPAR yes 35771026
chr1 226003113 226003134 IRF1 JASPAR yes 35771027
chr1 226003114 226003129 FOXP1 JASPAR yes 35771028
chr1 226003114 226003135 IRF1 JASPAR yes 35771029
chr1 226003115 226003130 FOXP1 JASPAR yes 35771030
chr1 226003115 226003136 IRF1 JASPAR yes 35771031
chr1 226003116 226003131 FOXP1 JASPAR yes 35771032
chr1 226003116 226003137 IRF1 JASPAR yes 35771033
chr1 226003117 226003132 FOXP1 JASPAR yes 35771034
chr1 226003118 226003133 FOXP1 JASPAR yes 35771035
chr1 226003119 226003134 FOXP1 JASPAR yes 35771036
chr1 226003120 226003135 FOXP1 JASPAR yes 35771037
Genes associated with rs200270890[chr1:226003120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More