EnhancerDB
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  3. rs200278156[chr6:25316401]
Enhancers that have rs200278156[chr6:25316401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25307668 25322997 enh38930
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Breast Neural Stem Cells (H9) Heart
Transcript factors that have rs200278156[chr6:25316401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25316384 25316405 IRF1 JASPAR yes 100844876
chr6 25316388 25316402 STAT1 JASPAR yes 100844877
chr6 25316388 25316403 PRDM1 JASPAR yes 100844878
chr6 25316388 25316403 STAT2 JASPAR yes 100844879
chr6 25316389 25316401 IRF1 JASPAR yes 100844880
Genes associated with rs200278156[chr6:25316401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 26115101 26124154 - HIST1H2BC ENSG00000180596.7 26124154 798700 Breast 0.207242 6232