EnhancerDB
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Enhancers that have rs200323079[chr16:4340585]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200323079[chr16:4340585]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4335970 4340905 TCF7L2 GTRD no Colon (HCT116) 21686304
chr16 4339547 4340798 ZNF143 GTRD no Epithelial (MCF-7) 21686374
chr16 4339573 4340621 ZNF143 GTRD no Epithelial (MCF-7) 21686379
chr16 4339931 4340829 TCF7L2 GTRD no Colon (HCT116) 21686383
chr16 4339982 4341093 ZNF143 GTRD no Epithelial (MCF-7) 21686384
chr16 4340064 4340744 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686385
chr16 4340128 4340632 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686386
chr16 4340152 4340662 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686387
chr16 4340160 4340730 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21686388
chr16 4340162 4340626 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21686389
chr16 4340168 4340638 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21686391
chr16 4340169 4340825 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21686392
chr16 4340180 4340636 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686393
chr16 4340196 4340846 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686395
chr16 4340215 4341102 TCF7L2 GTRD no Colon (HCT116) 21686396
chr16 4340230 4340600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686398
chr16 4340244 4340588 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686400
chr16 4340245 4340585 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686401
chr16 4340246 4340967 TCF7L2 GTRD no Colon (HCT116) 21686402
chr16 4340259 4340589 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686405
chr16 4340266 4340650 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686407
chr16 4340285 4340897 TCF7L2 GTRD no Colon (HCT116) 21686412
chr16 4340306 4340596 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686415
chr16 4340328 4342002 ZNF143 GTRD no Epithelial (MCF-7) 21686418
chr16 4340379 4340703 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21686422
chr16 4340426 4340653 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686423
chr16 4340571 4340586 PRDM1 JASPAR yes 9267220
chr16 4340571 4340592 ZNF263 JASPAR yes 9267221
chr16 4340572 4340593 ZNF263 JASPAR yes 9267222
chr16 4340574 4340585 E2F6 JASPAR yes 9267223
chr16 4340574 4340595 ZNF263 JASPAR yes 9267224
chr16 4340575 4340587 NF-kappaB TRANSFAC yes 9267225
chr16 4340575 4340596 ZNF263 JASPAR yes 9267226
chr16 4340580 4340601 ZNF263 JASPAR yes 9267227
chr16 4340581 4340602 ZNF263 JASPAR yes 9267228
chr16 4340583 4340604 ZNF263 JASPAR yes 9267229
chr16 4340584 4340605 ZNF263 JASPAR yes 9267230
Genes associated with rs200323079[chr16:4340585], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More