EnhancerDB
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  3. rs200329175[chr1:16214821]
Enhancers that have rs200329175[chr1:16214821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16203705 16215635 enh81
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200329175[chr1:16214821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16214801 16214822 IRF1 JASPAR yes 27011243
chr1 16214807 16214828 IRF1 JASPAR yes 27011247
chr1 16214813 16214828 MEF2C JASPAR yes 27011248
chr1 16214813 16214834 IRF1 JASPAR yes 27011249
chr1 16214814 16214826 MEF2A JASPAR yes 27011250
chr1 16214816 16214827 PHOX2A JASPAR yes 27011251
chr1 16214816 16214827 PROP1 JASPAR yes 27011252
chr1 16214818 16214828 HOXA13 JASPAR yes 27011253
chr1 16214818 16214828 HOXD13 JASPAR yes 27011254
chr1 16214818 16214829 HOXA10 JASPAR yes 27011255
chr1 16214819 16214828 CDX1 JASPAR yes 27011256
chr1 16214819 16214830 CDX2 JASPAR yes 27011257
Genes associated with rs200329175[chr1:16214821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More