EnhancerDB
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  3. rs200346241[chr16:68822927]
Enhancers that have rs200346241[chr16:68822927]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 68818509 68829474 enh16745
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs200346241[chr16:68822927]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 68822915 68822930 FOXP1 JASPAR yes 11226721
chr16 68822915 68822930 HNF1A JASPAR yes 11226722
chr16 68822916 68822930 POU4F1 JASPAR yes 11226723
chr16 68822916 68822932 POU4F3 JASPAR yes 11226724
chr16 68822917 68822928 FOXB1 JASPAR yes 11226725
chr16 68822917 68822928 FOXC1 JASPAR yes 11226726
chr16 68822917 68822929 FOXC2 JASPAR yes 11226727
chr16 68822923 68822938 PRDM1 JASPAR yes 11226728
Genes associated with rs200346241[chr16:68822927], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 67973653 67978034 - LCAT ENSG00000213398.3 67978034 844893 Ovary 0.259492 14978