EnhancerDB
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  3. rs200355299[chr6:44005050]
Enhancers that have rs200355299[chr6:44005050]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200355299[chr6:44005050]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44005045 44005060 MEF2C JASPAR yes 101815909
chr6 44005048 44005063 FOXP1 JASPAR yes 101815910
chr6 44005049 44005055 TBP TRANSFAC yes 101815911
chr6 44005049 44005064 FOXP1 JASPAR yes 101815912
chr6 44005050 44005065 FOXP1 JASPAR yes 101815913
Genes associated with rs200355299[chr6:44005050], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More