EnhancerDB
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  3. rs200356189[chr6:11204992]
Enhancers that have rs200356189[chr6:11204992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200356189[chr6:11204992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11204971 11204992 IRF1 JASPAR yes 99863772
chr6 11204971 11204992 ZNF263 JASPAR yes 99863773
chr6 11204974 11204995 ZNF263 JASPAR yes 99863774
chr6 11204975 11204996 ZNF263 JASPAR yes 99863775
chr6 11204977 11204992 FOXP1 JASPAR yes 99863776
chr6 11204977 11204998 IRF1 JASPAR yes 99863777
chr6 11204978 11204999 ZNF263 JASPAR yes 99863778
chr6 11204981 11204996 PRDM1 JASPAR yes 99863779
chr6 11204982 11205003 IRF1 JASPAR yes 99863780
chr6 11204985 11204999 IRF7 JASPAR yes 99863781
chr6 11204986 11205000 STAT1 JASPAR yes 99863782
chr6 11204986 11205001 PRDM1 JASPAR yes 99863783
chr6 11204986 11205001 STAT2 JASPAR yes 99863784
chr6 11204990 11204995 ETS2 TRANSFAC yes 99863785
Genes associated with rs200356189[chr6:11204992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More