EnhancerDB
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  3. rs200378163[chr12:109106041]
Enhancers that have rs200378163[chr12:109106041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109103554 109121615 enh14974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200378163[chr12:109106041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109106028 109106043 FOXA1 JASPAR yes 123614884
chr12 109106040 109106046 TBP TRANSFAC yes 123614887
Genes associated with rs200378163[chr12:109106041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More