EnhancerDB
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  3. rs200396883[chr3:58031200]
Enhancers that have rs200396883[chr3:58031200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200396883[chr3:58031200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58031183 58031201 IRF2 JASPAR yes 2668783
chr3 58031184 58031205 IRF1 JASPAR yes 2668784
chr3 58031187 58031201 SPIC JASPAR yes 2668785
chr3 58031196 58031211 FOXP1 JASPAR yes 2668787
Genes associated with rs200396883[chr3:58031200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More