EnhancerDB
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  3. rs200402132[chr6:30761962]
Enhancers that have rs200402132[chr6:30761962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200402132[chr6:30761962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30761948 30761969 IRF1 JASPAR yes 101050742
chr6 30761951 30761965 SPI1 JASPAR yes 101050743
chr6 30761951 30761972 IRF1 JASPAR yes 101050744
chr6 30761952 30761973 IRF1 JASPAR yes 101050745
chr6 30761954 30761969 FOXP1 JASPAR yes 101050746
chr6 30761956 30761971 FOXP1 JASPAR yes 101050747
chr6 30761957 30761972 FOXP1 JASPAR yes 101050748
chr6 30761957 30761977 RREB1 JASPAR yes 101050749
chr6 30761957 30761978 IRF1 JASPAR yes 101050750
chr6 30761958 30761979 IRF1 JASPAR yes 101050751
chr6 30761959 30761974 FOXP1 JASPAR yes 101050752
chr6 30761959 30761979 RREB1 JASPAR yes 101050753
Genes associated with rs200402132[chr6:30761962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More