EnhancerDB
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  3. rs200422519[chr6:30754089]
Enhancers that have rs200422519[chr6:30754089]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200422519[chr6:30754089]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30754079 30754094 FOXP1 JASPAR yes 101049473
chr6 30754083 30754098 SCRT1 JASPAR yes 101049474
chr6 30754086 30754107 IRF1 JASPAR yes 101049475
chr6 30754087 30754093 PTF TRANSFAC yes 101049476
Genes associated with rs200422519[chr6:30754089], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More