EnhancerDB
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  3. rs200486399[chr2:232532709]
Enhancers that have rs200486399[chr2:232532709]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200486399[chr2:232532709]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232532690 232532710 RREB1 JASPAR yes 81734054
chr2 232532692 232532712 RREB1 JASPAR yes 81734055
chr2 232532693 232532713 RREB1 JASPAR yes 81734056
chr2 232532697 232532717 RREB1 JASPAR yes 81734058
chr2 232532699 232532714 FOXA1 JASPAR yes 81734059
chr2 232532700 232532712 FOXI1 JASPAR yes 81734060
chr2 232532701 232532713 FOXC2 JASPAR yes 81734061
chr2 232532703 232532714 FOXA1 JASPAR yes 81734062
chr2 232532704 232532719 FOXP1 JASPAR yes 81734063
chr2 232532705 232532716 FOXP2 JASPAR yes 81734064
chr2 232532705 232532717 FOXC2 JASPAR yes 81734065
chr2 232532705 232532720 STAT2 JASPAR yes 81734066
chr2 232532706 232532721 FOXP1 JASPAR yes 81734067
chr2 232532709 232532724 FOXP1 JASPAR yes 81734068
Genes associated with rs200486399[chr2:232532709], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More