EnhancerDB
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  3. rs200508928[chr2:227528743]
Enhancers that have rs200508928[chr2:227528743]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200508928[chr2:227528743]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227528728 227528743 FOXA1 JASPAR yes 81480819
chr2 227528728 227528744 POU4F2 JASPAR yes 81480820
chr2 227528728 227528744 POU4F3 JASPAR yes 81480821
chr2 227528731 227528745 ONECUT2 JASPAR yes 81480827
chr2 227528731 227528745 ONECUT3 JASPAR yes 81480828
chr2 227528731 227528746 FOXP1 JASPAR yes 81480829
chr2 227528731 227528746 HNF1A JASPAR yes 81480830
chr2 227528732 227528746 POU4F1 JASPAR yes 81480831
chr2 227528732 227528747 FOXA1 JASPAR yes 81480832
chr2 227528732 227528748 POU4F2 JASPAR yes 81480833
chr2 227528732 227528748 POU4F3 JASPAR yes 81480834
chr2 227528733 227528744 FOXB1 JASPAR yes 81480835
chr2 227528733 227528744 FOXC1 JASPAR yes 81480836
chr2 227528733 227528744 PROP1 JASPAR yes 81480837
chr2 227528733 227528745 FOXC2 JASPAR yes 81480838
chr2 227528734 227528746 FOXI1 JASPAR yes 81480839
chr2 227528735 227528749 ONECUT2 JASPAR yes 81480840
chr2 227528735 227528749 ONECUT3 JASPAR yes 81480841
chr2 227528735 227528750 FOXP1 JASPAR yes 81480842
chr2 227528735 227528750 HNF1A JASPAR yes 81480843
chr2 227528736 227528750 POU4F1 JASPAR yes 81480844
chr2 227528736 227528751 FOXA1 JASPAR yes 81480845
chr2 227528737 227528748 FOXB1 JASPAR yes 81480846
chr2 227528737 227528748 FOXC1 JASPAR yes 81480847
chr2 227528737 227528748 PROP1 JASPAR yes 81480848
chr2 227528737 227528749 FOXC2 JASPAR yes 81480849
chr2 227528738 227528750 FOXI1 JASPAR yes 81480850
chr2 227528740 227528754 POU4F1 JASPAR yes 81480851
chr2 227528740 227528756 POU4F2 JASPAR yes 81480852
chr2 227528740 227528756 POU4F3 JASPAR yes 81480853
Genes associated with rs200508928[chr2:227528743], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More