EnhancerDB
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  3. rs200530398[chr17:41483096]
Enhancers that have rs200530398[chr17:41483096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200530398[chr17:41483096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41483091 41483106 MEF2C JASPAR yes 54342685
chr17 41483092 41483113 IRF1 JASPAR yes 54342686
chr17 41483093 41483108 FOXP1 JASPAR yes 54342687
chr17 41483095 41483101 TBP TRANSFAC yes 54342688
chr17 41483095 41483110 FOXP1 JASPAR yes 54342689
chr17 41483096 41483117 IRF1 JASPAR yes 54342690
Genes associated with rs200530398[chr17:41483096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More