EnhancerDB
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  3. rs200551679[chr17:65416032]
Enhancers that have rs200551679[chr17:65416032]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs200551679[chr17:65416032]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65416029 65416044 FOXP1 JASPAR yes 55501079
chr17 65416031 65416046 FOXP1 JASPAR yes 55501080
chr17 65416032 65416047 STAT2 JASPAR yes 55501081
chr17 65416032 65416053 IRF1 JASPAR yes 55501082
Genes associated with rs200551679[chr17:65416032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More