EnhancerDB
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  3. rs200554580[chr1:168453826]
Enhancers that have rs200554580[chr1:168453826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs200554580[chr1:168453826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168453741 168455109 ZBTB33 GTRD no Brain (SK-N-SH) 21348359
chr1 168453746 168455134 ZBTB33 GTRD no Brain (SK-N-SH) 21348360
chr1 168453814 168453835 IRF1 JASPAR yes 32930788
chr1 168453821 168453836 FOXP1 JASPAR yes 32930789
chr1 168453822 168453833 FOXP2 JASPAR yes 32930790
chr1 168453822 168453842 RREB1 JASPAR yes 32930791
chr1 168453823 168453838 FOXP1 JASPAR yes 32930792
chr1 168453823 168453843 RREB1 JASPAR yes 32930793
chr1 168453826 168453846 RREB1 JASPAR yes 32930794
Genes associated with rs200554580[chr1:168453826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More