EnhancerDB
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  3. rs200560067[chr17:65480036]
Enhancers that have rs200560067[chr17:65480036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs200560067[chr17:65480036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65480024 65480045 IRF1 JASPAR yes 55510144
chr17 65480026 65480041 PRDM1 JASPAR yes 55510145
chr17 65480026 65480041 STAT2 JASPAR yes 55510146
chr17 65480027 65480041 SPIC JASPAR yes 55510147
chr17 65480027 65480041 STAT1 JASPAR yes 55510148
chr17 65480028 65480049 IRF1 JASPAR yes 55510149
chr17 65480029 65480044 FOXP1 JASPAR yes 55510150
chr17 65480029 65480050 IRF1 JASPAR yes 55510151
chr17 65480030 65480051 IRF1 JASPAR yes 55510152
chr17 65480031 65480046 FOXP1 JASPAR yes 55510153
chr17 65480031 65480052 IRF1 JASPAR yes 55510154
chr17 65480033 65480048 FOXP1 JASPAR yes 55510155
chr17 65480034 65480049 FOXP1 JASPAR yes 55510156
chr17 65480035 65480050 FOXP1 JASPAR yes 55510157
chr17 65480036 65480051 FOXP1 JASPAR yes 55510158
Genes associated with rs200560067[chr17:65480036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More