EnhancerDB
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  3. rs200626934[chr12:109079390]
Enhancers that have rs200626934[chr12:109079390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109075725 109093399 enh14973
Bone Marrow (K562) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200626934[chr12:109079390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109079384 109079395 HOXC11 JASPAR yes 123612458
chr12 109079384 109079395 HOXC12 JASPAR yes 123612459
chr12 109079384 109079395 HOXC13 JASPAR yes 123612460
chr12 109079385 109079395 HOXD11 JASPAR yes 123612461
chr12 109079389 109079395 TBP TRANSFAC yes 123612462
Genes associated with rs200626934[chr12:109079390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More