EnhancerDB
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  3. rs200633290[chr2:227524773]
Enhancers that have rs200633290[chr2:227524773]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200633290[chr2:227524773]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227524762 227524775 SMAD2 JASPAR yes 81480146
chr2 227524763 227524784 IRF1 JASPAR yes 81480147
chr2 227524769 227524790 IRF1 JASPAR yes 81480148
chr2 227524772 227524786 IRF7 JASPAR yes 81480149
chr2 227524773 227524787 SPIC JASPAR yes 81480150
chr2 227524773 227524787 STAT1 JASPAR yes 81480151
chr2 227524773 227524788 PRDM1 JASPAR yes 81480152
chr2 227524773 227524788 STAT2 JASPAR yes 81480153
Genes associated with rs200633290[chr2:227524773], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More