EnhancerDB
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  3. rs200640006[chr3:176895480]
Enhancers that have rs200640006[chr3:176895480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 176893264 176911265 enh7692
Skin (Keratinocyte) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
Transcript factors that have rs200640006[chr3:176895480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 176895478 176895488 ALX3 JASPAR yes 7841953
chr3 176895478 176895488 MEOX2 JASPAR yes 7841954
chr3 176895478 176895488 MNX1 JASPAR yes 7841955
chr3 176895478 176895490 MEF2A JASPAR yes 7841956
chr3 176895479 176895487 LBX1 JASPAR yes 7841957
chr3 176895479 176895487 PDX1 JASPAR yes 7841958
chr3 176895479 176895487 VAX1 JASPAR yes 7841959
chr3 176895479 176895487 VAX2 JASPAR yes 7841960
chr3 176895479 176895487 VSX1 JASPAR yes 7841961
chr3 176895479 176895487 VSX2 JASPAR yes 7841962
chr3 176895479 176895489 MEF2A JASPAR yes 7841963
Genes associated with rs200640006[chr3:176895480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More