EnhancerDB
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  3. rs200644659[chr12:109106859]
Enhancers that have rs200644659[chr12:109106859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109103554 109121615 enh14974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200644659[chr12:109106859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109106849 109106864 STAT1 JASPAR yes 123615049
chr12 109106851 109106862 STAT1 JASPAR yes 123615050
chr12 109106851 109106862 STAT3 JASPAR yes 123615051
chr12 109106853 109106868 FOXP1 JASPAR yes 123615052
chr12 109106854 109106869 FOXP1 JASPAR yes 123615053
chr12 109106857 109106872 STAT2 JASPAR yes 123615054
Genes associated with rs200644659[chr12:109106859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More