EnhancerDB
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  3. rs200676467[chr2:240179430]
Enhancers that have rs200676467[chr2:240179430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 240179337 240179507 vista35494
VISTA
Transcript factors that have rs200676467[chr2:240179430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240179226 240179596 JUN UCSC Txn Factor no Conserved 108436002
chr2 240179241 240179511 FOS UCSC Txn Factor no Conserved 108436003
chr2 240179249 240179604 JUND UCSC Txn Factor no Conserved 108436004
chr2 240179292 240179490 FOSL2 UCSC Txn Factor no Conserved 108436005
chr2 240179313 240179472 ATF3 UCSC Txn Factor no Conserved 108436006
chr2 240179319 240180141 SETDB1 UCSC Txn Factor no Conserved 108436007
chr2 240179421 240179431 GSX1 JASPAR yes 22245472
chr2 240179421 240179431 GSX1 JASPAR yes 82222137
chr2 240179427 240179442 JUND JASPAR yes 22245473
chr2 240179427 240179442 JUND JASPAR yes 82222138
chr2 240179428 240179441 JUN JASPAR yes 22245474
chr2 240179428 240179441 JUN JASPAR yes 82222139
chr2 240179429 240179442 ATF4 JASPAR yes 22245475
chr2 240179429 240179442 ATF4 JASPAR yes 82222140
chr2 240179429 240179443 ATF7 JASPAR yes 22245476
chr2 240179429 240179443 BATF3 JASPAR yes 22245477
chr2 240179429 240179443 ATF7 JASPAR yes 82222141
chr2 240179429 240179443 BATF3 JASPAR yes 82222142
chr2 240179430 240179442 JDP2 JASPAR yes 22245478
chr2 240179430 240179442 JDP2 JASPAR yes 82222143
chr2 240179430 240179445 JUND JASPAR yes 22245479
chr2 240179430 240179445 JUND JASPAR yes 82222144
Genes associated with rs200676467[chr2:240179430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More