EnhancerDB
  1. Home
  2. SNP
  3. rs200678135[chr1:25092500]
Enhancers that have rs200678135[chr1:25092500]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200678135[chr1:25092500]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25092482 25092503 IRF1 JASPAR yes 27528785
chr1 25092487 25092501 IRF7 JASPAR yes 27528786
chr1 25092487 25092502 MEF2A JASPAR yes 27528787
chr1 25092488 25092503 MEF2C JASPAR yes 27528788
chr1 25092488 25092509 IRF1 JASPAR yes 27528789
chr1 25092489 25092501 MEF2A JASPAR yes 27528790
chr1 25092489 25092501 MEF2B JASPAR yes 27528791
chr1 25092489 25092501 MEF2D JASPAR yes 27528792
chr1 25092490 25092500 MEF2A JASPAR yes 27528793
chr1 25092496 25092511 STAT2 JASPAR yes 27528794
chr1 25092499 25092514 FOXP1 JASPAR yes 27528795
Genes associated with rs200678135[chr1:25092500], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More