EnhancerDB
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  3. rs200804196[chr12:46843485]
Enhancers that have rs200804196[chr12:46843485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200804196[chr12:46843485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46843479 46843500 IRF1 JASPAR yes 120622546
chr12 46843481 46843496 PRDM1 JASPAR yes 120622547
chr12 46843481 46843496 STAT2 JASPAR yes 120622548
chr12 46843484 46843499 FOXP1 JASPAR yes 120622549
Genes associated with rs200804196[chr12:46843485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More