EnhancerDB
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  3. rs200880916[chr5:172443979]
Enhancers that have rs200880916[chr5:172443979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172432905 172446573 enh22818
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs200880916[chr5:172443979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172443969 172443979 ETS1 JASPAR yes 67848623
chr5 172443969 172443980 ETV2 JASPAR yes 67848624
chr5 172443974 172443982 MEIS3 JASPAR yes 67848625
chr5 172443975 172443979 NFE TRANSFAC yes 67848626
Genes associated with rs200880916[chr5:172443979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More