EnhancerDB
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  3. rs200884101[chr5:79475871]
Enhancers that have rs200884101[chr5:79475871]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200884101[chr5:79475871]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79475865 79475875 HOXB13 JASPAR yes 63702368
chr5 79475866 79475876 ALX3 JASPAR yes 63702369
chr5 79475866 79475876 EN2 JASPAR yes 63702370
chr5 79475866 79475876 ESX1 JASPAR yes 63702371
chr5 79475866 79475876 GBX1 JASPAR yes 63702372
chr5 79475866 79475876 GBX2 JASPAR yes 63702373
chr5 79475866 79475876 GSX1 JASPAR yes 63702374
chr5 79475866 79475876 GSX2 JASPAR yes 63702375
chr5 79475866 79475876 HESX1 JASPAR yes 63702376
chr5 79475866 79475876 HOXA2 JASPAR yes 63702377
chr5 79475866 79475876 LBX2 JASPAR yes 63702378
chr5 79475866 79475876 LHX2 JASPAR yes 63702379
chr5 79475866 79475876 MIXL1 JASPAR yes 63702380
chr5 79475866 79475876 RAX JASPAR yes 63702381
chr5 79475867 79475875 BARX1 JASPAR yes 63702382
chr5 79475867 79475875 BSX JASPAR yes 63702383
chr5 79475867 79475875 DLX6 JASPAR yes 63702384
chr5 79475867 79475875 ISX JASPAR yes 63702385
chr5 79475867 79475875 LBX1 JASPAR yes 63702386
chr5 79475867 79475875 LHX9 JASPAR yes 63702387
chr5 79475867 79475875 MSX1 JASPAR yes 63702388
chr5 79475867 79475875 MSX2 JASPAR yes 63702389
chr5 79475867 79475875 NKX6-2 JASPAR yes 63702390
chr5 79475867 79475875 PRRX1 JASPAR yes 63702391
chr5 79475867 79475875 RAX2 JASPAR yes 63702392
chr5 79475867 79475875 SHOX JASPAR yes 63702393
chr5 79475867 79475875 UNCX JASPAR yes 63702394
Genes associated with rs200884101[chr5:79475871], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More