EnhancerDB
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  3. rs200911534[chr6:30741569]
Enhancers that have rs200911534[chr6:30741569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200911534[chr6:30741569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30741557 30741570 DUXA JASPAR yes 101047408
chr6 30741558 30741569 DUX4 JASPAR yes 101047409
chr6 30741558 30741569 PHOX2A JASPAR yes 101047410
chr6 30741558 30741569 PROP1 JASPAR yes 101047411
chr6 30741568 30741574 TBP TRANSFAC yes 101047412
Genes associated with rs200911534[chr6:30741569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More