EnhancerDB
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  3. rs200993122[chr1:204262517]
Enhancers that have rs200993122[chr1:204262517]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 204261217 204266185 vista127
VISTA
Transcript factors that have rs200993122[chr1:204262517]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204262506 204262520 PLAG1 JASPAR yes 34689373
chr1 204262506 204262520 PLAG1 JASPAR yes 71155360
chr1 204262511 204262518 E2F1 TRANSFAC yes 34689374
chr1 204262511 204262518 E2F1 TRANSFAC yes 71155361
Genes associated with rs200993122[chr1:204262517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More