EnhancerDB
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  3. rs201056729[chr1:117425643]
Enhancers that have rs201056729[chr1:117425643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs201056729[chr1:117425643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117425152 117428810 ZNF274 GTRD no Bone Marrow (K562) 21334101
chr1 117425308 117425922 ZNF274 GTRD no Bone Marrow (K562) 21334102
chr1 117425626 117425646 TBX19 JASPAR yes 31848625
chr1 117425635 117425649 POU1F1 JASPAR yes 31848628
chr1 117425638 117425653 MEF2C JASPAR yes 31848629
chr1 117425639 117425654 MEF2A JASPAR yes 31848630
chr1 117425642 117425648 TBP TRANSFAC yes 31848631
Genes associated with rs201056729[chr1:117425643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More