EnhancerDB
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  3. rs201204424[chr6:15890412]
Enhancers that have rs201204424[chr6:15890412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 15886429 15917995 enh8970
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Esophagus Lung Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Neural Stem Cells (H9) Heart
Transcript factors that have rs201204424[chr6:15890412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 15890401 15890416 MEF2C JASPAR yes 100250221
chr6 15890402 15890417 MEF2A JASPAR yes 100250222
chr6 15890403 15890415 MEF2A JASPAR yes 100250223
chr6 15890403 15890415 MEF2D JASPAR yes 100250224
chr6 15890405 15890419 FOXF2 JASPAR yes 100250225
chr6 15890405 15890420 FOXP1 JASPAR yes 100250226
chr6 15890406 15890417 FOXA1 JASPAR yes 100250227
chr6 15890406 15890417 FOXH1 JASPAR yes 100250228
chr6 15890406 15890421 FOXA1 JASPAR yes 100250229
chr6 15890407 15890418 FOXB1 JASPAR yes 100250230
chr6 15890407 15890418 FOXC1 JASPAR yes 100250231
chr6 15890407 15890419 FOXC2 JASPAR yes 100250232
chr6 15890408 15890419 FOXP2 JASPAR yes 100250233
chr6 15890408 15890420 FOXI1 JASPAR yes 100250234
chr6 15890409 15890424 FOXP1 JASPAR yes 100250235
chr6 15890410 15890418 FOXG1 JASPAR yes 100250236
chr6 15890410 15890418 FOXO3 JASPAR yes 100250237
chr6 15890410 15890421 FOXA1 JASPAR yes 100250238
chr6 15890410 15890425 FOXA1 JASPAR yes 100250239
chr6 15890411 15890423 FOXC2 JASPAR yes 100250240
chr6 15890412 15890424 FOXI1 JASPAR yes 100250241
chr6 15890412 15890432 RREB1 JASPAR yes 100250242
Genes associated with rs201204424[chr6:15890412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More