EnhancerDB
  1. Home
  2. SNP
  3. rs201220113[chr17:56022988]
Enhancers that have rs201220113[chr17:56022988]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201220113[chr17:56022988]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56022974 56022988 POU1F1 JASPAR yes 55003149
chr17 56022975 56022988 POU2F2 JASPAR yes 55003150
chr17 56022976 56022988 FOXC2 JASPAR yes 55003152
chr17 56022985 56022994 SRY JASPAR yes 55003153
chr17 56022987 56022990 MYB TRANSFAC yes 55003154
Genes associated with rs201220113[chr17:56022988], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More