EnhancerDB
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  3. rs201220705[chr6:44010446]
Enhancers that have rs201220705[chr6:44010446]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201220705[chr6:44010446]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44010434 44010448 TLX1 JASPAR yes 101816702
chr6 44010441 44010454 ELF1 JASPAR yes 101816703
chr6 44010444 44010451 ETS1 TRANSFAC yes 101816704
chr6 44010444 44010454 GABPA JASPAR yes 101816705
Genes associated with rs201220705[chr6:44010446], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More